CDS

Accession Number TCMCG051C02431
gbkey CDS
Protein Id XP_024445948.1
Location complement(join(15449464..15449625,15449959..15450088,15450337..15450443,15450951..15451044,15451120..15451316,15451743..15451814,15451971..15452085,15452635..15452751,15452849..15452940,15453045..15453221,15453334..15453408,15453496..15453636,15453963..15454151,15454723..15454788,15454899..15455049,15455178..15455246,15455901..15456049,15456146..15456277,15456365..15456690,15456836..15456872,15457695..15457749,15457898..15457959,15458053..15458073,15458672..15458674))
Gene LOC7472972
GeneID 7472972
Organism Populus trichocarpa

Protein

Length 912aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_024590180.1
Definition coatomer subunit beta'-2 isoform X3 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category U
Description The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
ko04147        [VIEW IN KEGG]
KEGG_ko ko:K17302        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005794        [VIEW IN EMBL-EBI]
GO:0005798        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0006888        [VIEW IN EMBL-EBI]
GO:0006890        [VIEW IN EMBL-EBI]
GO:0006891        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0012506        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016192        [VIEW IN EMBL-EBI]
GO:0030117        [VIEW IN EMBL-EBI]
GO:0030120        [VIEW IN EMBL-EBI]
GO:0030126        [VIEW IN EMBL-EBI]
GO:0030135        [VIEW IN EMBL-EBI]
GO:0030137        [VIEW IN EMBL-EBI]
GO:0030659        [VIEW IN EMBL-EBI]
GO:0030660        [VIEW IN EMBL-EBI]
GO:0030662        [VIEW IN EMBL-EBI]
GO:0030663        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0031410        [VIEW IN EMBL-EBI]
GO:0031982        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044431        [VIEW IN EMBL-EBI]
GO:0044433        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0048193        [VIEW IN EMBL-EBI]
GO:0048475        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0097708        [VIEW IN EMBL-EBI]
GO:0098588        [VIEW IN EMBL-EBI]
GO:0098796        [VIEW IN EMBL-EBI]
GO:0098805        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCCTCTCAGACTCGAAATCAAGAGGAAACTTGCTCAAAGATCAGAGAGAGTAAAGTCAGTCGATCTACATCCAACTGAACCATGGATTTTAGTGAGTTTGTATTCAGGGACTGTGTGTATCTGGAACTACCAGTCACAGACCATGGCAAAGTCTTTTGAGGTCACTGAATTACCAGTTAGGTCAGCCAAGTTTATAGCACGAAAGCAGTGGGTTGTTGCTGGGGCCGATGACATGTATATTCGTGTGTACAACTACAACACAATGGATAAGATAAAAGTTTTAGAGGCGCATACAGATTACATTAGATGTGTGGCTGTCCATCCTACCCTTCCATATGTGTTGTCATCATCTGATGACATGCTTATAAAACTTTGGGATTGGGAGAAGGGTTGGGCCTGTACTCAGATATTTGAGGGGCATTCTCATTATGTGATGCAGGTTACTTTTAATCCTAAAGACACCAACACTTTCGCAAGCGCATCCCTTGATCGCACCATAAAGATATGGAATCTTGGCTCTCCCGACCCAAATTTCACTCTGGATGCCCATCAGAAAGGAGTAAATTGTGTCGATTACTTTACTGGTGGAGATAAACCTTATCTAATAACTGGTTCTGATGATCACACTGCGAAGGTATGGGACTATCAAACTAAAAGTTGCGTCCAGACTTTGGACGGCCATACACACAATGTCTCTGCTGTATGTTTCCATCCCGAACTTCCAATAATAATTACAGGTTCTGAGGATGGGACTGTTCGTATATGGCATTCAACAACTTACAGGCTTGAGAACACCTTGAATTATGGCCTAGAAAGAGTTTGGGCTGTTGGATACATGAAAGGTTCACGCCGTATTGTGATTGGGTATGATGAAGGAACCATTATGGTCAAGATCGGCCGAGAAGAACCTGTAGCTAGCATGGACAATAGTGGAAAGATTATATGGGCCAAGCACAATGAAATTCAAACTGTGAACATTAAGAGTGTGGGGGCAGATTTTGAGGTCACTGATGGTGAAAGATTGCCTTTGGCTGTTAAGGAGTTGGGAACATGTGATCTTTACCCCCAAATCTTAAAGCACAATCCCAATGGGAGGTTTGTTGTTGTCTGCGGAGATGGTGAGTACATCATATATACAGCTTTAGCATGGAGAAACAGATCATTTGGTTCTGCACTTGAATTCGTTTGGTCTGCTGATGGTGAATATGCTGTTAGAGAAAGTACATCAAAGATAAAGATTTTCAGTAAAAATTTCCAGGAAAAGAAGAGCATCCGGCCAACCTTTTCAGCTGAGCGTATTCACGGAGGAACCCTGTTGGCTATGTGCTCAAATGATTTCATTTGTTTCTATGACTGGGCTGAATGCAGGTTGATTAGGAGAATTGATGTTACTGTGAAGAATCTCTTTTGGGCTGACAGCGGAGATTTAGTGGCTATTGCAAGTGATACGTCATTCTACATCCTCAAATACAATCGTGAGATAGTTTCATCTTATTTAGATAATGGAAAACCTGTAGATGAACAAGGTATTGAGGATGCATTTGAGCTTCTTCATGAAACCAATGAACGTGTCAGAACTGGCTTATGGGTTGGGGATTGTTTTATATATAACAACTCCTCCTGGAGGCTTAATTATTGTGTTGGAGGCGAGGTAACCACTATGTATCATCTGGACCGTCCCATGTACTTACTGGGGTACCTTGCTGGTCAAAGTCGGGTGTATTTGATAGACAAAGAATTCAATGTCATGGGGTACACTTTACTCCTTAGCTTAATTGAGTACAAGACTCTGGTGATGCGGGGAGATCTGGAGAGGGCCAGTGAAGTTTTACCTTCAATTCCTAAAGAACACCATAATAGTGTGGCTCGTTTCTTGGAATCACGAGGCATGATAGAGGATGCTCTGGAAGTAGCTACTGACCCTGATTACAGATTTGAGCTAGCTATTCAGCTTGGTAGATTAGAGGCTGCGAAGGAAATTGCCAGTGAAGTGCAGAGTGAGTCAAAGTGGAAACAGTTGGGAGAGTTGGCCATGTCCAGTGGAAAGTTGGAAATGGCTGAGGAATGCATGAGGCATGCAACAGACTTGAGTGGTTTGCTGCTACTGTATTCTTCCTTAGGAGATGCTGAAGGGATATCAAAGCTTGGATCCTTGGCAAAAGAACAGGGGAAGATAAATGTTGCATTCCTTTGTTTGTTCATGTTGGGCAAAGTTGAAGACTGCCTCCAGTTGTTGGTGGAAAGCAATCGGATACCTGAGGCTGCTTTGATGGCACGATCTTATCTTCCCAGCAAGGTTTCAGAGATTGTTGCAATTTGGAGGAAAGACCTGAACAAGGTCAATCCAAAAGCTGCAGAATCTCTGGCTGATCCTGAAGAATATCCAAATTTGTTTGATGATTGGCAAGTTGCTTTATCTGTCGAATCTAGAGCTGCAGGGACAAGGGGTGTGCATCCTCCCGCAGAGGACTACCAATACCATGCTGATAAACCTCACATCACCCTCGTGGAGGCTTTCAGAAACATGCAAGTAGAAGAGGAGGAACCTCTTGAAAATGGAGACTTTGATCATGAGAATGGAGACGAACATAATGCCGAGGAACAGAATGGCGAAGAAGGGAGCCAAGAGGAAGCAGTTGTGGTGGATGCAGATTCCACAGATGGTGCTGTACTTGTTAATGGAAACGAACCTGAGGAAGAGTGGGGTACGAATAATGAAGAAACCCCGTCAGCCTAA
Protein:  
MPLRLEIKRKLAQRSERVKSVDLHPTEPWILVSLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFIARKQWVVAGADDMYIRVYNYNTMDKIKVLEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWACTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHSTTYRLENTLNYGLERVWAVGYMKGSRRIVIGYDEGTIMVKIGREEPVASMDNSGKIIWAKHNEIQTVNIKSVGADFEVTDGERLPLAVKELGTCDLYPQILKHNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSADGEYAVRESTSKIKIFSKNFQEKKSIRPTFSAERIHGGTLLAMCSNDFICFYDWAECRLIRRIDVTVKNLFWADSGDLVAIASDTSFYILKYNREIVSSYLDNGKPVDEQGIEDAFELLHETNERVRTGLWVGDCFIYNNSSWRLNYCVGGEVTTMYHLDRPMYLLGYLAGQSRVYLIDKEFNVMGYTLLLSLIEYKTLVMRGDLERASEVLPSIPKEHHNSVARFLESRGMIEDALEVATDPDYRFELAIQLGRLEAAKEIASEVQSESKWKQLGELAMSSGKLEMAEECMRHATDLSGLLLLYSSLGDAEGISKLGSLAKEQGKINVAFLCLFMLGKVEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKDLNKVNPKAAESLADPEEYPNLFDDWQVALSVESRAAGTRGVHPPAEDYQYHADKPHITLVEAFRNMQVEEEEPLENGDFDHENGDEHNAEEQNGEEGSQEEAVVVDADSTDGAVLVNGNEPEEEWGTNNEETPSA